Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ckap2Q3V1H1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ckap2Q3V1H1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Gm28659-201ENSMUST00000188013 759 ntBASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Gm5864-201ENSMUST00000202263 970 ntBASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ckap2Q3V1H1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Ckap2Q3V1H1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ckap2Q3V1H1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ckap2Q3V1H1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Gm5682-201ENSMUST00000173402 505 ntBASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Grk6-207ENSMUST00000225925 2769 ntBASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ckap2Q3V1H1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Gm7222-201ENSMUST00000117512 906 ntBASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.88■□□□□ 0.45
Ckap2Q3V1H1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap2Q3V1H1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.87■□□□□ 0.45
Ckap2Q3V1H1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap2Q3V1H1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ckap2Q3V1H1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap2Q3V1H1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap2Q3V1H1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.87■□□□□ 0.45
Ckap2Q3V1H1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ckap2Q3V1H1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ckap2Q3V1H1 Gm11452-201ENSMUST00000122376 690 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms