Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Usp48Q3V0C5 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Gm11764-201ENSMUST00000120221 623 ntBASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 AA543401-201ENSMUST00000164248 1269 ntBASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Usp48Q3V0C5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC19.3■□□□□ 0.68
Usp48Q3V0C5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Usp48Q3V0C5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Gm42918-201ENSMUST00000199249 1580 ntBASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Gm13616-201ENSMUST00000120600 222 ntBASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Usp48Q3V0C5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.28■□□□□ 0.68
Usp48Q3V0C5 Gm5682-201ENSMUST00000173402 505 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms