Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Trim80Q3V061 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trim80Q3V061 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim80Q3V061 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim80Q3V061 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trim80Q3V061 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
Trim80Q3V061 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trim80Q3V061 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim80Q3V061 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim80Q3V061 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.19■□□□□ 0.18
Trim80Q3V061 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim80Q3V061 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.19■□□□□ 0.18
Trim80Q3V061 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.19■□□□□ 0.18
Trim80Q3V061 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.19■□□□□ 0.18
Trim80Q3V061 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.19■□□□□ 0.18
Trim80Q3V061 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trim80Q3V061 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trim80Q3V061 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trim80Q3V061 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trim80Q3V061 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Trim80Q3V061 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Trim80Q3V061 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.18■□□□□ 0.18
Trim80Q3V061 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Trim80Q3V061 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim80Q3V061 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trim80Q3V061 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trim80Q3V061 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.18■□□□□ 0.18
Trim80Q3V061 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trim80Q3V061 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.18■□□□□ 0.18
Trim80Q3V061 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trim80Q3V061 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.18■□□□□ 0.18
Trim80Q3V061 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trim80Q3V061 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.17■□□□□ 0.18
Trim80Q3V061 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.17■□□□□ 0.18
Trim80Q3V061 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim80Q3V061 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Gm18958-201ENSMUST00000174258 762 ntBASIC16.17■□□□□ 0.18
Trim80Q3V061 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.17■□□□□ 0.18
Trim80Q3V061 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.17■□□□□ 0.18
Trim80Q3V061 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trim80Q3V061 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim80Q3V061 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim80Q3V061 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trim80Q3V061 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms