Protein–RNA interactions for Protein: Q3UU56

Gm29609, Predicted gene 29609, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm29609Q3UU56 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Gm25911-201ENSMUST00000157621 56 ntBASIC16.42■□□□□ 0.22
Gm29609Q3UU56 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Gm29609Q3UU56 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm29609Q3UU56 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm29609Q3UU56 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Mir6956-201ENSMUST00000183598 62 ntBASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm29609Q3UU56 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Gm11025-201ENSMUST00000140773 466 ntBASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm29609Q3UU56 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm29609Q3UU56 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm29609Q3UU56 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm29609Q3UU56 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm29609Q3UU56 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm29609Q3UU56 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm29609Q3UU56 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms