Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.32□□□□□ -0.6
Cks1brtQ3UNC9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Cks1brtQ3UNC9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cks1brtQ3UNC9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cks1brtQ3UNC9 Gm6139-201ENSMUST00000079261 882 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms