Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Spg11Q3UHA3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Gm16570-201ENSMUST00000161951 436 ntBASIC14.31□□□□□ -0.12
Spg11Q3UHA3 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.31□□□□□ -0.12
Spg11Q3UHA3 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.31□□□□□ -0.12
Spg11Q3UHA3 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Spg11Q3UHA3 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Gm43179-201ENSMUST00000198797 275 ntBASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Gm15823-201ENSMUST00000064305 670 ntBASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Spg11Q3UHA3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Gm17420-201ENSMUST00000164753 153 ntBASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.29□□□□□ -0.12
Spg11Q3UHA3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.29□□□□□ -0.12
Spg11Q3UHA3 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Spg11Q3UHA3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Snora78-201ENSMUST00000158630 128 ntBASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Spg11Q3UHA3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms