Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mmp25Q3U435 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.69□□□□□ -0.06
Mmp25Q3U435 Mir5131-201ENSMUST00000175426 93 ntBASIC14.69□□□□□ -0.06
Mmp25Q3U435 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mmp25Q3U435 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mmp25Q3U435 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Mmp25Q3U435 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Mmp25Q3U435 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mmp25Q3U435 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.69□□□□□ -0.06
Mmp25Q3U435 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Mmp25Q3U435 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Mmp25Q3U435 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Mmp25Q3U435 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Mmp25Q3U435 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.68□□□□□ -0.06
Mmp25Q3U435 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Gm2651-201ENSMUST00000203560 838 ntBASIC14.68□□□□□ -0.06
Mmp25Q3U435 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Mmp25Q3U435 AV026068-213ENSMUST00000223675 1171 ntBASIC14.68□□□□□ -0.06
Mmp25Q3U435 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp25Q3U435 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.67□□□□□ -0.06
Mmp25Q3U435 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Gm14722-201ENSMUST00000118943 689 ntBASIC14.67□□□□□ -0.06
Mmp25Q3U435 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp25Q3U435 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.66□□□□□ -0.06
Mmp25Q3U435 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.66□□□□□ -0.06
Mmp25Q3U435 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Gm11764-201ENSMUST00000120221 623 ntBASIC14.66□□□□□ -0.06
Mmp25Q3U435 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.66□□□□□ -0.06
Mmp25Q3U435 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp25Q3U435 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms