Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Gm15222-202ENSMUST00000228667 1726 ntBASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Gm6263-201ENSMUST00000120029 1342 ntBASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trpm1Q2TV84 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trpm1Q2TV84 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Trpm1Q2TV84 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trpm1Q2TV84 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trpm1Q2TV84 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trpm1Q2TV84 Gm42466-201ENSMUST00000202099 1301 ntBASIC21.97■■□□□ 1.11
Trpm1Q2TV84 Gm12138-201ENSMUST00000122180 951 ntBASIC21.97■■□□□ 1.11
Trpm1Q2TV84 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC21.97■■□□□ 1.11
Trpm1Q2TV84 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trpm1Q2TV84 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trpm1Q2TV84 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trpm1Q2TV84 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Trpm1Q2TV84 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trpm1Q2TV84 Gm5357-201ENSMUST00000212720 1924 ntBASIC21.96■■□□□ 1.11
Trpm1Q2TV84 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Trpm1Q2TV84 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Trpm1Q2TV84 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Trpm1Q2TV84 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trpm1Q2TV84 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Trpm1Q2TV84 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trpm1Q2TV84 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trpm1Q2TV84 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trpm1Q2TV84 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Trpm1Q2TV84 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 AC131743.5-201ENSMUST00000220775 1618 ntBASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Gm4875-201ENSMUST00000118257 786 ntBASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Dupd1-202ENSMUST00000224735 548 ntBASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Trpm1Q2TV84 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trpm1Q2TV84 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trpm1Q2TV84 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC21.94■■□□□ 1.1
Trpm1Q2TV84 Gm14042-201ENSMUST00000120139 833 ntBASIC21.94■■□□□ 1.1
Trpm1Q2TV84 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trpm1Q2TV84 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trpm1Q2TV84 Gm6218-201ENSMUST00000219812 628 ntBASIC21.94■■□□□ 1.1
Trpm1Q2TV84 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trpm1Q2TV84 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trpm1Q2TV84 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trpm1Q2TV84 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC21.94■■□□□ 1.1
Trpm1Q2TV84 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Trpm1Q2TV84 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trpm1Q2TV84 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Trpm1Q2TV84 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trpm1Q2TV84 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trpm1Q2TV84 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trpm1Q2TV84 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trpm1Q2TV84 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trpm1Q2TV84 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trpm1Q2TV84 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trpm1Q2TV84 Gm18187-201ENSMUST00000196476 984 ntBASIC21.92■■□□□ 1.1
Trpm1Q2TV84 AC154239.3-201ENSMUST00000226933 674 ntBASIC21.92■■□□□ 1.1
Trpm1Q2TV84 Gm44729-201ENSMUST00000206759 2052 ntBASIC21.92■■□□□ 1.1
Trpm1Q2TV84 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trpm1Q2TV84 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trpm1Q2TV84 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trpm1Q2TV84 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trpm1Q2TV84 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trpm1Q2TV84 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC21.92■■□□□ 1.1
Trpm1Q2TV84 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trpm1Q2TV84 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC21.91■■□□□ 1.1
Trpm1Q2TV84 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC21.91■■□□□ 1.1
Trpm1Q2TV84 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC21.91■■□□□ 1.1
Trpm1Q2TV84 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC21.91■■□□□ 1.1
Trpm1Q2TV84 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trpm1Q2TV84 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trpm1Q2TV84 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Trpm1Q2TV84 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trpm1Q2TV84 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trpm1Q2TV84 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms