Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 AC125206.2-201ENSMUST00000217454 574 ntBASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.54■□□□□ 0.56
Chrna5Q2MKA5 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Gm10154-201ENSMUST00000084445 354 ntBASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Chrna5Q2MKA5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Gm23547-201ENSMUST00000158210 271 ntBASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chrna5Q2MKA5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chrna5Q2MKA5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chrna5Q2MKA5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chrna5Q2MKA5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Gm27618-201ENSMUST00000183671 60 ntBASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chrna5Q2MKA5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 Gm27437-201ENSMUST00000183429 107 ntBASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Chrna5Q2MKA5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms