Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab42Q0PD08 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rab42Q0PD08 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Rab42Q0PD08 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Rab42Q0PD08 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab42Q0PD08 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab42Q0PD08 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab42Q0PD08 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Rab42Q0PD08 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Gm13474-201ENSMUST00000122466 815 ntBASIC13.87□□□□□ -0.19
Rab42Q0PD08 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.87□□□□□ -0.19
Rab42Q0PD08 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.87□□□□□ -0.19
Rab42Q0PD08 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.87□□□□□ -0.19
Rab42Q0PD08 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rab42Q0PD08 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Gm16061-201ENSMUST00000122167 857 ntBASIC13.86□□□□□ -0.19
Rab42Q0PD08 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.86□□□□□ -0.19
Rab42Q0PD08 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.86□□□□□ -0.19
Rab42Q0PD08 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rab42Q0PD08 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.85□□□□□ -0.19
Rab42Q0PD08 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.85□□□□□ -0.19
Rab42Q0PD08 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.85□□□□□ -0.19
Rab42Q0PD08 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab42Q0PD08 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab42Q0PD08 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab42Q0PD08 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rab42Q0PD08 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab42Q0PD08 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab42Q0PD08 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rab42Q0PD08 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Rab42Q0PD08 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab42Q0PD08 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms