Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.92□□□□□ -0.18
Chd8Q09XV5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Chd8Q09XV5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.91□□□□□ -0.18
Chd8Q09XV5 Gm3961-201ENSMUST00000204425 994 ntBASIC13.91□□□□□ -0.18
Chd8Q09XV5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.91□□□□□ -0.18
Chd8Q09XV5 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.91□□□□□ -0.18
Chd8Q09XV5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Gm14263-201ENSMUST00000117955 746 ntBASIC13.91□□□□□ -0.18
Chd8Q09XV5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Chd8Q09XV5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.9□□□□□ -0.18
Chd8Q09XV5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Gm37986-201ENSMUST00000193285 383 ntBASIC13.9□□□□□ -0.18
Chd8Q09XV5 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.9□□□□□ -0.18
Chd8Q09XV5 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.9□□□□□ -0.18
Chd8Q09XV5 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.9□□□□□ -0.18
Chd8Q09XV5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Gm28760-201ENSMUST00000185995 736 ntBASIC13.9□□□□□ -0.18
Chd8Q09XV5 Gm29787-201ENSMUST00000222129 849 ntBASIC13.9□□□□□ -0.18
Chd8Q09XV5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Chd8Q09XV5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.89□□□□□ -0.19
Chd8Q09XV5 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Gm21854-201ENSMUST00000179901 471 ntBASIC13.89□□□□□ -0.19
Chd8Q09XV5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Chd8Q09XV5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Chd8Q09XV5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Chd8Q09XV5 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chd8Q09XV5 Gm27701-201ENSMUST00000184498 110 ntBASIC13.88□□□□□ -0.19
Chd8Q09XV5 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.88□□□□□ -0.19
Chd8Q09XV5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.88□□□□□ -0.19
Chd8Q09XV5 Nsd1-205ENSMUST00000224693 852 ntBASIC13.88□□□□□ -0.19
Chd8Q09XV5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Chd8Q09XV5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chd8Q09XV5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms