Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pfdn6Q03958 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Pfdn6Q03958 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pfdn6Q03958 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pfdn6Q03958 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pfdn6Q03958 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Gm25406-201ENSMUST00000157599 105 ntBASIC15.7■□□□□ 0.1
Pfdn6Q03958 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Pfdn6Q03958 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.7■□□□□ 0.1
Pfdn6Q03958 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.7■□□□□ 0.1
Pfdn6Q03958 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pfdn6Q03958 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Gm7284-201ENSMUST00000131667 944 ntBASIC15.69■□□□□ 0.1
Pfdn6Q03958 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Gm9172-201ENSMUST00000212092 954 ntBASIC15.69■□□□□ 0.1
Pfdn6Q03958 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pfdn6Q03958 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.68■□□□□ 0.1
Pfdn6Q03958 Olfr129-201ENSMUST00000122318 993 ntBASIC15.68■□□□□ 0.1
Pfdn6Q03958 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Pfdn6Q03958 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms