Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IhhP97812 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IhhP97812 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.16■□□□□ 0.18
IhhP97812 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.16■□□□□ 0.18
IhhP97812 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IhhP97812 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.16■□□□□ 0.18
IhhP97812 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IhhP97812 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.16■□□□□ 0.18
IhhP97812 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.16■□□□□ 0.18
IhhP97812 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.16■□□□□ 0.18
IhhP97812 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.16■□□□□ 0.18
IhhP97812 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.16■□□□□ 0.18
IhhP97812 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.16■□□□□ 0.18
IhhP97812 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IhhP97812 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
IhhP97812 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
IhhP97812 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.15■□□□□ 0.18
IhhP97812 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.15■□□□□ 0.18
IhhP97812 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IhhP97812 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Gm4995-201ENSMUST00000117247 432 ntBASIC16.15■□□□□ 0.18
IhhP97812 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
IhhP97812 Gm9727-201ENSMUST00000161387 555 ntBASIC16.15■□□□□ 0.18
IhhP97812 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.15■□□□□ 0.18
IhhP97812 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.15■□□□□ 0.18
IhhP97812 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
IhhP97812 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.15■□□□□ 0.18
IhhP97812 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
IhhP97812 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
IhhP97812 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
IhhP97812 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
IhhP97812 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.14■□□□□ 0.17
IhhP97812 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.14■□□□□ 0.17
IhhP97812 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
IhhP97812 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
IhhP97812 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
IhhP97812 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.14■□□□□ 0.17
IhhP97812 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.14■□□□□ 0.17
IhhP97812 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IhhP97812 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
IhhP97812 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.13■□□□□ 0.17
IhhP97812 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
IhhP97812 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.13■□□□□ 0.17
IhhP97812 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
IhhP97812 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
IhhP97812 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.13■□□□□ 0.17
IhhP97812 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.13■□□□□ 0.17
IhhP97812 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.13■□□□□ 0.17
IhhP97812 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
IhhP97812 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms