Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Pdlim4P70271 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pdlim4P70271 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim4P70271 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13□□□□□ -0.33
Pdlim4P70271 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pdlim4P70271 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pdlim4P70271 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13□□□□□ -0.33
Pdlim4P70271 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pdlim4P70271 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pdlim4P70271 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13□□□□□ -0.33
Pdlim4P70271 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13□□□□□ -0.33
Pdlim4P70271 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13□□□□□ -0.33
Pdlim4P70271 Gm25406-201ENSMUST00000157599 105 ntBASIC13□□□□□ -0.33
Pdlim4P70271 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13□□□□□ -0.33
Pdlim4P70271 Gm17971-201ENSMUST00000190239 806 ntBASIC13□□□□□ -0.33
Pdlim4P70271 Gm9172-201ENSMUST00000212092 954 ntBASIC13□□□□□ -0.33
Pdlim4P70271 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pdlim4P70271 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Pdlim4P70271 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pdlim4P70271 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim4P70271 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim4P70271 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.99□□□□□ -0.33
Pdlim4P70271 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim4P70271 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.99□□□□□ -0.33
Pdlim4P70271 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.99□□□□□ -0.33
Pdlim4P70271 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.99□□□□□ -0.33
Pdlim4P70271 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pdlim4P70271 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim4P70271 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pdlim4P70271 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Pdlim4P70271 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pdlim4P70271 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms