Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Lmo4P61969 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.61□□□□□ -0.39
Lmo4P61969 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Lmo4P61969 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.6□□□□□ -0.39
Lmo4P61969 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Lmo4P61969 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.6□□□□□ -0.39
Lmo4P61969 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.6□□□□□ -0.39
Lmo4P61969 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.6□□□□□ -0.39
Lmo4P61969 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.6□□□□□ -0.39
Lmo4P61969 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.6□□□□□ -0.39
Lmo4P61969 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lmo4P61969 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.59□□□□□ -0.39
Lmo4P61969 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.59□□□□□ -0.39
Lmo4P61969 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lmo4P61969 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Gm15427-201ENSMUST00000117288 531 ntBASIC12.59□□□□□ -0.39
Lmo4P61969 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.59□□□□□ -0.39
Lmo4P61969 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.59□□□□□ -0.39
Lmo4P61969 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.59□□□□□ -0.39
Lmo4P61969 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Lmo4P61969 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lmo4P61969 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.59□□□□□ -0.39
Lmo4P61969 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.59□□□□□ -0.39
Lmo4P61969 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Lmo4P61969 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lmo4P61969 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lmo4P61969 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.58□□□□□ -0.4
Lmo4P61969 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lmo4P61969 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Lmo4P61969 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.58□□□□□ -0.4
Lmo4P61969 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.58□□□□□ -0.4
Lmo4P61969 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Lmo4P61969 Gm27494-201ENSMUST00000184735 189 ntBASIC12.58□□□□□ -0.4
Lmo4P61969 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.58□□□□□ -0.4
Lmo4P61969 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lmo4P61969 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lmo4P61969 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lmo4P61969 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms