Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.91□□□□□ -0.18
Sf3b6P59708 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.91□□□□□ -0.18
Sf3b6P59708 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.91□□□□□ -0.18
Sf3b6P59708 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.91□□□□□ -0.18
Sf3b6P59708 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Sf3b6P59708 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.91□□□□□ -0.18
Sf3b6P59708 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.91□□□□□ -0.18
Sf3b6P59708 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.91□□□□□ -0.18
Sf3b6P59708 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Sf3b6P59708 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Sf3b6P59708 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Sf3b6P59708 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Sf3b6P59708 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.9□□□□□ -0.18
Sf3b6P59708 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.9□□□□□ -0.18
Sf3b6P59708 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b6P59708 Gm16061-201ENSMUST00000122167 857 ntBASIC13.9□□□□□ -0.18
Sf3b6P59708 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.9□□□□□ -0.18
Sf3b6P59708 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Gm45058-201ENSMUST00000205810 766 ntBASIC13.9□□□□□ -0.18
Sf3b6P59708 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Sf3b6P59708 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Sf3b6P59708 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sf3b6P59708 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Sf3b6P59708 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.9□□□□□ -0.19
Sf3b6P59708 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Sf3b6P59708 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Sf3b6P59708 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Sf3b6P59708 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Sf3b6P59708 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.89□□□□□ -0.19
Sf3b6P59708 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sf3b6P59708 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.89□□□□□ -0.19
Sf3b6P59708 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Sf3b6P59708 Mir5130-201ENSMUST00000175160 84 ntBASIC13.89□□□□□ -0.19
Sf3b6P59708 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Sf3b6P59708 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sf3b6P59708 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b6P59708 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b6P59708 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b6P59708 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b6P59708 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.88□□□□□ -0.19
Sf3b6P59708 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.88□□□□□ -0.19
Sf3b6P59708 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.88□□□□□ -0.19
Sf3b6P59708 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sf3b6P59708 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.88□□□□□ -0.19
Sf3b6P59708 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b6P59708 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.88□□□□□ -0.19
Sf3b6P59708 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b6P59708 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sf3b6P59708 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms