Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Vps33bP59016 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps33bP59016 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps33bP59016 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Vps33bP59016 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Gm13233-201ENSMUST00000118760 1443 ntBASIC19.6■□□□□ 0.73
Vps33bP59016 Gm13244-201ENSMUST00000118855 1446 ntBASIC19.6■□□□□ 0.73
Vps33bP59016 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Vps33bP59016 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Vps33bP59016 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Vps33bP59016 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Vps33bP59016 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Vps33bP59016 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Vps33bP59016 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Vps33bP59016 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vps33bP59016 Gm44344-201ENSMUST00000200287 129 ntBASIC19.6■□□□□ 0.73
Vps33bP59016 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Vps33bP59016 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Vps33bP59016 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps33bP59016 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.59■□□□□ 0.73
Vps33bP59016 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.59■□□□□ 0.73
Vps33bP59016 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Gm15321-201ENSMUST00000121290 288 ntBASIC19.59■□□□□ 0.73
Vps33bP59016 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Gm24694-201ENSMUST00000180054 110 ntBASIC19.59■□□□□ 0.73
Vps33bP59016 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Gm27920-201ENSMUST00000183953 96 ntBASIC19.59■□□□□ 0.73
Vps33bP59016 Gm27663-201ENSMUST00000184839 110 ntBASIC19.59■□□□□ 0.73
Vps33bP59016 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC19.59■□□□□ 0.73
Vps33bP59016 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps33bP59016 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps33bP59016 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Vps33bP59016 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.58■□□□□ 0.72
Vps33bP59016 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.58■□□□□ 0.72
Vps33bP59016 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps33bP59016 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps33bP59016 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps33bP59016 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.58■□□□□ 0.72
Vps33bP59016 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.58■□□□□ 0.72
Vps33bP59016 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps33bP59016 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps33bP59016 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.58■□□□□ 0.72
Vps33bP59016 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps33bP59016 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC19.57■□□□□ 0.72
Vps33bP59016 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Vps33bP59016 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.57■□□□□ 0.72
Vps33bP59016 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Vps33bP59016 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Vps33bP59016 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.57■□□□□ 0.72
Vps33bP59016 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC19.57■□□□□ 0.72
Vps33bP59016 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC19.57■□□□□ 0.72
Vps33bP59016 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Vps33bP59016 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
Vps33bP59016 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps33bP59016 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vps33bP59016 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33bP59016 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Vps33bP59016 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vps33bP59016 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Vps33bP59016 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33bP59016 AC158529.1-201ENSMUST00000223618 239 ntBASIC19.56■□□□□ 0.72
Vps33bP59016 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vps33bP59016 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.56■□□□□ 0.72
Vps33bP59016 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Vps33bP59016 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33bP59016 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33bP59016 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps33bP59016 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33bP59016 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.55■□□□□ 0.72
Vps33bP59016 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps33bP59016 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms