Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.65■□□□□ 0.42
Rrp1P56183 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp1P56183 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp1P56183 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rrp1P56183 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rrp1P56183 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rrp1P56183 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rrp1P56183 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp1P56183 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp1P56183 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp1P56183 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rrp1P56183 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp1P56183 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.64■□□□□ 0.41
Rrp1P56183 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.64■□□□□ 0.41
Rrp1P56183 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp1P56183 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.64■□□□□ 0.41
Rrp1P56183 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rrp1P56183 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp1P56183 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rrp1P56183 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp1P56183 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp1P56183 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rrp1P56183 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rrp1P56183 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.63■□□□□ 0.41
Rrp1P56183 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.63■□□□□ 0.41
Rrp1P56183 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.63■□□□□ 0.41
Rrp1P56183 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rrp1P56183 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Rrp1P56183 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rrp1P56183 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rrp1P56183 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rrp1P56183 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rrp1P56183 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Rrp1P56183 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rrp1P56183 Gm10013-201ENSMUST00000106074 672 ntBASIC17.62■□□□□ 0.41
Rrp1P56183 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rrp1P56183 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Rrp1P56183 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rrp1P56183 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rrp1P56183 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rrp1P56183 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rrp1P56183 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.61■□□□□ 0.41
Rrp1P56183 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.61■□□□□ 0.41
Rrp1P56183 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rrp1P56183 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rrp1P56183 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rrp1P56183 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rrp1P56183 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rrp1P56183 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rrp1P56183 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.61■□□□□ 0.41
Rrp1P56183 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rrp1P56183 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp1P56183 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rrp1P56183 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp1P56183 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.6■□□□□ 0.41
Rrp1P56183 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.6■□□□□ 0.41
Rrp1P56183 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp1P56183 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rrp1P56183 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms