Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh5P55284 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh5P55284 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh5P55284 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.27■□□□□ 0.03
Cdh5P55284 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdh5P55284 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Cdh5P55284 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.26■□□□□ 0.03
Cdh5P55284 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdh5P55284 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdh5P55284 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdh5P55284 Mir3081-201ENSMUST00000175305 84 ntBASIC15.26■□□□□ 0.03
Cdh5P55284 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.26■□□□□ 0.03
Cdh5P55284 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.26■□□□□ 0.03
Cdh5P55284 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Cdh5P55284 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdh5P55284 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.25■□□□□ 0.03
Cdh5P55284 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdh5P55284 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.25■□□□□ 0.03
Cdh5P55284 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdh5P55284 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdh5P55284 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdh5P55284 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdh5P55284 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdh5P55284 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdh5P55284 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdh5P55284 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdh5P55284 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cdh5P55284 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cdh5P55284 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.24■□□□□ 0.03
Cdh5P55284 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cdh5P55284 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cdh5P55284 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdh5P55284 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Cdh5P55284 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdh5P55284 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdh5P55284 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdh5P55284 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdh5P55284 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 128.1 ms