Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nub1P54729 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nub1P54729 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.83■□□□□ 0.28
Nub1P54729 Gm12497-201ENSMUST00000138778 237 ntBASIC16.83■□□□□ 0.28
Nub1P54729 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Nub1P54729 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.83■□□□□ 0.28
Nub1P54729 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Nub1P54729 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Nub1P54729 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nub1P54729 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Nub1P54729 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nub1P54729 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nub1P54729 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nub1P54729 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Nub1P54729 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.82■□□□□ 0.28
Nub1P54729 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.82■□□□□ 0.28
Nub1P54729 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.82■□□□□ 0.28
Nub1P54729 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nub1P54729 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nub1P54729 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.81■□□□□ 0.28
Nub1P54729 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nub1P54729 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Nub1P54729 Gm7153-201ENSMUST00000117092 455 ntBASIC16.81■□□□□ 0.28
Nub1P54729 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.81■□□□□ 0.28
Nub1P54729 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.81■□□□□ 0.28
Nub1P54729 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.81■□□□□ 0.28
Nub1P54729 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nub1P54729 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.81■□□□□ 0.28
Nub1P54729 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
Nub1P54729 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nub1P54729 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Nub1P54729 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Gm44357-201ENSMUST00000195897 142 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm19658-201ENSMUST00000196231 138 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm44367-201ENSMUST00000196836 138 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm44350-201ENSMUST00000197197 138 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm44390-201ENSMUST00000197533 144 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm44313-201ENSMUST00000198018 138 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm44486-201ENSMUST00000198508 138 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm44314-201ENSMUST00000199263 138 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm44394-201ENSMUST00000199558 138 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm44484-201ENSMUST00000199873 138 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm44466-201ENSMUST00000200264 138 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Gm44359-201ENSMUST00000200671 138 ntBASIC16.8■□□□□ 0.28
Nub1P54729 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.8■□□□□ 0.28
Nub1P54729 Gm18622-201ENSMUST00000219361 595 ntBASIC16.8■□□□□ 0.28
Nub1P54729 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nub1P54729 App-207ENSMUST00000227737 2827 ntBASIC16.8■□□□□ 0.28
Nub1P54729 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nub1P54729 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.8■□□□□ 0.28
Nub1P54729 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.79■□□□□ 0.28
Nub1P54729 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nub1P54729 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms