Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brca1P48754 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brca1P48754 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brca1P48754 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Brca1P48754 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Brca1P48754 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Brca1P48754 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.38■□□□□ 0.37
Brca1P48754 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.38■□□□□ 0.37
Brca1P48754 Gm18737-201ENSMUST00000173594 937 ntBASIC17.38■□□□□ 0.37
Brca1P48754 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Brca1P48754 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Brca1P48754 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Brca1P48754 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brca1P48754 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Brca1P48754 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Brca1P48754 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Brca1P48754 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Brca1P48754 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Brca1P48754 Gm27920-201ENSMUST00000183953 96 ntBASIC17.37■□□□□ 0.37
Brca1P48754 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.37■□□□□ 0.37
Brca1P48754 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.37■□□□□ 0.37
Brca1P48754 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Brca1P48754 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Brca1P48754 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.37■□□□□ 0.37
Brca1P48754 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.37■□□□□ 0.37
Brca1P48754 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.37■□□□□ 0.37
Brca1P48754 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Brca1P48754 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.36■□□□□ 0.37
Brca1P48754 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Brca1P48754 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.36■□□□□ 0.37
Brca1P48754 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Brca1P48754 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.36■□□□□ 0.37
Brca1P48754 Gm24694-201ENSMUST00000180054 110 ntBASIC17.36■□□□□ 0.37
Brca1P48754 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Gm27663-201ENSMUST00000184839 110 ntBASIC17.36■□□□□ 0.37
Brca1P48754 Gm6888-201ENSMUST00000221983 706 ntBASIC17.36■□□□□ 0.37
Brca1P48754 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Brca1P48754 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.36■□□□□ 0.37
Brca1P48754 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Brca1P48754 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Brca1P48754 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Brca1P48754 Gm15487-201ENSMUST00000122373 465 ntBASIC17.35■□□□□ 0.37
Brca1P48754 Gm9824-201ENSMUST00000178707 561 ntBASIC17.35■□□□□ 0.37
Brca1P48754 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.35■□□□□ 0.37
Brca1P48754 Gm7775-201ENSMUST00000218871 853 ntBASIC17.35■□□□□ 0.37
Brca1P48754 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.35■□□□□ 0.37
Brca1P48754 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Brca1P48754 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brca1P48754 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brca1P48754 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.35■□□□□ 0.37
Brca1P48754 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brca1P48754 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brca1P48754 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Brca1P48754 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brca1P48754 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Brca1P48754 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.35■□□□□ 0.37
Brca1P48754 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brca1P48754 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Brca1P48754 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Brca1P48754 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Brca1P48754 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Brca1P48754 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms