Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.09■□□□□ 0.01
Rph3aP47708 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.09■□□□□ 0.01
Rph3aP47708 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rph3aP47708 Gm25745-201ENSMUST00000174945 133 ntBASIC15.09■□□□□ 0.01
Rph3aP47708 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.09■□□□□ 0.01
Rph3aP47708 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rph3aP47708 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.09■□□□□ 0.01
Rph3aP47708 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rph3aP47708 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.09■□□□□ 0.01
Rph3aP47708 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rph3aP47708 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Rph3aP47708 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rph3aP47708 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rph3aP47708 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rph3aP47708 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rph3aP47708 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rph3aP47708 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rph3aP47708 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.08■□□□□ 0
Rph3aP47708 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Rph3aP47708 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Rph3aP47708 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rph3aP47708 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.08■□□□□ 0
Rph3aP47708 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.08■□□□□ 0
Rph3aP47708 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.08■□□□□ 0
Rph3aP47708 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rph3aP47708 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Rph3aP47708 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rph3aP47708 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.07■□□□□ 0
Rph3aP47708 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.07■□□□□ 0
Rph3aP47708 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rph3aP47708 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.07■□□□□ 0
Rph3aP47708 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.07■□□□□ 0
Rph3aP47708 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Rph3aP47708 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Rph3aP47708 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rph3aP47708 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Gm12644-201ENSMUST00000119935 606 ntBASIC15.06■□□□□ 0
Rph3aP47708 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Rph3aP47708 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.06■□□□□ 0
Rph3aP47708 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Gm10819-201ENSMUST00000099988 561 ntBASIC15.06■□□□□ 0
Rph3aP47708 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rph3aP47708 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.06■□□□□ 0
Rph3aP47708 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rph3aP47708 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.05■□□□□ 0
Rph3aP47708 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Rph3aP47708 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.05■□□□□ 0
Rph3aP47708 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms