Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Syt7-205ENSMUST00000224135 1557 ntBASIC18.74■□□□□ 0.59
Nedd4P46935 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Gm6973-201ENSMUST00000117080 721 ntBASIC18.74■□□□□ 0.59
Nedd4P46935 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.74■□□□□ 0.59
Nedd4P46935 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.74■□□□□ 0.59
Nedd4P46935 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.74■□□□□ 0.59
Nedd4P46935 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.74■□□□□ 0.59
Nedd4P46935 Gm10154-201ENSMUST00000084445 354 ntBASIC18.74■□□□□ 0.59
Nedd4P46935 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Nedd4P46935 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.74■□□□□ 0.59
Nedd4P46935 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nedd4P46935 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd4P46935 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.73■□□□□ 0.59
Nedd4P46935 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd4P46935 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd4P46935 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd4P46935 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nedd4P46935 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd4P46935 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.73■□□□□ 0.59
Nedd4P46935 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Nedd4P46935 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.73■□□□□ 0.59
Nedd4P46935 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.73■□□□□ 0.59
Nedd4P46935 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd4P46935 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.73■□□□□ 0.59
Nedd4P46935 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Nedd4P46935 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.73■□□□□ 0.59
Nedd4P46935 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nedd4P46935 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd4P46935 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nedd4P46935 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Nedd4P46935 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nedd4P46935 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd4P46935 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nedd4P46935 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd4P46935 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd4P46935 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Nedd4P46935 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd4P46935 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nedd4P46935 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd4P46935 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Nedd4P46935 Gm16215-201ENSMUST00000161990 637 ntBASIC18.72■□□□□ 0.59
Nedd4P46935 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd4P46935 Gm44855-201ENSMUST00000205725 362 ntBASIC18.72■□□□□ 0.59
Nedd4P46935 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.72■□□□□ 0.59
Nedd4P46935 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd4P46935 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Nedd4P46935 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd4P46935 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd4P46935 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nedd4P46935 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Nedd4P46935 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.71■□□□□ 0.59
Nedd4P46935 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nedd4P46935 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Nedd4P46935 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.71■□□□□ 0.59
Nedd4P46935 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nedd4P46935 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Nedd4P46935 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Nedd4P46935 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nedd4P46935 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.7■□□□□ 0.58
Nedd4P46935 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nedd4P46935 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.7■□□□□ 0.58
Nedd4P46935 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nedd4P46935 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.7■□□□□ 0.58
Nedd4P46935 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.7■□□□□ 0.58
Nedd4P46935 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.7■□□□□ 0.58
Nedd4P46935 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nedd4P46935 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nedd4P46935 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms