Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Nkx2-6P43688 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Mir3113-201ENSMUST00000175478 76 ntBASIC14.77□□□□□ -0.05
Nkx2-6P43688 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.77□□□□□ -0.05
Nkx2-6P43688 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.77□□□□□ -0.05
Nkx2-6P43688 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.77□□□□□ -0.05
Nkx2-6P43688 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Nkx2-6P43688 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.76□□□□□ -0.05
Nkx2-6P43688 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Gm23935-201ENSMUST00000102303 57 ntBASIC14.76□□□□□ -0.05
Nkx2-6P43688 Gm24270-201ENSMUST00000102326 57 ntBASIC14.76□□□□□ -0.05
Nkx2-6P43688 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Gm24245-201ENSMUST00000157318 57 ntBASIC14.76□□□□□ -0.05
Nkx2-6P43688 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Nkx2-6P43688 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.75□□□□□ -0.05
Nkx2-6P43688 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Gm4995-201ENSMUST00000117247 432 ntBASIC14.75□□□□□ -0.05
Nkx2-6P43688 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Nkx2-6P43688 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms