Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.56■□□□□ 0.4
Sdc2P43407 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.56■□□□□ 0.4
Sdc2P43407 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sdc2P43407 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Sdc2P43407 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.56■□□□□ 0.4
Sdc2P43407 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Sdc2P43407 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sdc2P43407 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sdc2P43407 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Sdc2P43407 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 Gm15794-201ENSMUST00000120182 631 ntBASIC17.55■□□□□ 0.4
Sdc2P43407 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.55■□□□□ 0.4
Sdc2P43407 Gm23634-201ENSMUST00000175071 91 ntBASIC17.55■□□□□ 0.4
Sdc2P43407 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.55■□□□□ 0.4
Sdc2P43407 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.55■□□□□ 0.4
Sdc2P43407 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.55■□□□□ 0.4
Sdc2P43407 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Sdc2P43407 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.55■□□□□ 0.4
Sdc2P43407 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sdc2P43407 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Sdc2P43407 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.54■□□□□ 0.4
Sdc2P43407 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sdc2P43407 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.53■□□□□ 0.4
Sdc2P43407 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.53■□□□□ 0.4
Sdc2P43407 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sdc2P43407 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sdc2P43407 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sdc2P43407 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sdc2P43407 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms