Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cdx2P43241 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cdx2P43241 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cdx2P43241 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cdx2P43241 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.79□□□□□ -0.04
Cdx2P43241 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Cdx2P43241 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Gm16198-201ENSMUST00000118766 670 ntBASIC14.79□□□□□ -0.04
Cdx2P43241 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Cdx2P43241 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdx2P43241 Gm22175-201ENSMUST00000175007 78 ntBASIC14.79□□□□□ -0.04
Cdx2P43241 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Cdx2P43241 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.79□□□□□ -0.04
Cdx2P43241 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.79□□□□□ -0.04
Cdx2P43241 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cdx2P43241 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdx2P43241 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdx2P43241 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Cdx2P43241 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
Cdx2P43241 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.78□□□□□ -0.04
Cdx2P43241 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.78□□□□□ -0.04
Cdx2P43241 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Cdx2P43241 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdx2P43241 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.78□□□□□ -0.04
Cdx2P43241 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdx2P43241 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.77□□□□□ -0.04
Cdx2P43241 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdx2P43241 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.77□□□□□ -0.04
Cdx2P43241 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdx2P43241 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdx2P43241 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdx2P43241 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdx2P43241 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cdx2P43241 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cdx2P43241 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.77□□□□□ -0.05
Cdx2P43241 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.77□□□□□ -0.05
Cdx2P43241 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.77□□□□□ -0.05
Cdx2P43241 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Cdx2P43241 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.77□□□□□ -0.05
Cdx2P43241 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cdx2P43241 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cdx2P43241 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms