Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Gdf6P43028 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Gdf6P43028 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gdf6P43028 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Gdf6P43028 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Gdf6P43028 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Gdf6P43028 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.4■□□□□ 0.22
Gdf6P43028 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.4■□□□□ 0.22
Gdf6P43028 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.4■□□□□ 0.22
Gdf6P43028 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Gm6736-201ENSMUST00000166583 948 ntBASIC16.4■□□□□ 0.22
Gdf6P43028 Gm24513-201ENSMUST00000174964 138 ntBASIC16.4■□□□□ 0.22
Gdf6P43028 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.4■□□□□ 0.22
Gdf6P43028 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.4■□□□□ 0.22
Gdf6P43028 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Gdf6P43028 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gdf6P43028 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Gdf6P43028 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gdf6P43028 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.39■□□□□ 0.21
Gdf6P43028 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.39■□□□□ 0.21
Gdf6P43028 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gdf6P43028 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Gdf6P43028 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
Gdf6P43028 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.39■□□□□ 0.21
Gdf6P43028 Gm2756-201ENSMUST00000195851 400 ntBASIC16.39■□□□□ 0.21
Gdf6P43028 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.39■□□□□ 0.21
Gdf6P43028 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.39■□□□□ 0.21
Gdf6P43028 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gdf6P43028 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.38■□□□□ 0.21
Gdf6P43028 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.38■□□□□ 0.21
Gdf6P43028 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Gdf6P43028 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Gdf6P43028 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.38■□□□□ 0.21
Gdf6P43028 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gdf6P43028 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Gdf6P43028 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gdf6P43028 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gdf6P43028 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gdf6P43028 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gdf6P43028 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gdf6P43028 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Gdf6P43028 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gdf6P43028 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Gdf6P43028 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.37■□□□□ 0.21
Gdf6P43028 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.37■□□□□ 0.21
Gdf6P43028 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Gdf6P43028 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.37■□□□□ 0.21
Gdf6P43028 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.37■□□□□ 0.21
Gdf6P43028 Gm17968-201ENSMUST00000194902 784 ntBASIC16.37■□□□□ 0.21
Gdf6P43028 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms