Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.1□□□□□ -0.31
Hmx3P42581 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmx3P42581 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Hmx3P42581 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hmx3P42581 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Hmx3P42581 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Hmx3P42581 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.09□□□□□ -0.31
Hmx3P42581 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.09□□□□□ -0.31
Hmx3P42581 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.09□□□□□ -0.31
Hmx3P42581 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.09□□□□□ -0.31
Hmx3P42581 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.09□□□□□ -0.31
Hmx3P42581 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hmx3P42581 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hmx3P42581 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hmx3P42581 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.09□□□□□ -0.31
Hmx3P42581 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.09□□□□□ -0.31
Hmx3P42581 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Hmx3P42581 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hmx3P42581 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hmx3P42581 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hmx3P42581 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hmx3P42581 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hmx3P42581 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Hmx3P42581 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hmx3P42581 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.08□□□□□ -0.32
Hmx3P42581 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Hmx3P42581 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.08□□□□□ -0.32
Hmx3P42581 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.08□□□□□ -0.32
Hmx3P42581 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hmx3P42581 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Hmx3P42581 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.07□□□□□ -0.32
Hmx3P42581 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Hmx3P42581 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.07□□□□□ -0.32
Hmx3P42581 Gm37055-201ENSMUST00000191866 133 ntBASIC13.07□□□□□ -0.32
Hmx3P42581 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hmx3P42581 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Hmx3P42581 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hmx3P42581 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Hmx3P42581 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hmx3P42581 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms