Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.18□□□□□ -0.3
Mmp9P41245 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp9P41245 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp9P41245 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Mmp9P41245 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.18□□□□□ -0.3
Mmp9P41245 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp9P41245 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mmp9P41245 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Mmp9P41245 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Mmp9P41245 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.17□□□□□ -0.3
Mmp9P41245 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Mmp9P41245 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Mmp9P41245 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.17□□□□□ -0.3
Mmp9P41245 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Mmp9P41245 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Gm7638-201ENSMUST00000121348 967 ntBASIC13.17□□□□□ -0.3
Mmp9P41245 Gm27741-201ENSMUST00000185060 237 ntBASIC13.17□□□□□ -0.3
Mmp9P41245 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.17□□□□□ -0.3
Mmp9P41245 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Mmp9P41245 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Mmp9P41245 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Mmp9P41245 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp9P41245 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.16□□□□□ -0.3
Mmp9P41245 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Mmp9P41245 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.16□□□□□ -0.3
Mmp9P41245 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.16□□□□□ -0.3
Mmp9P41245 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Mmp9P41245 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.16□□□□□ -0.3
Mmp9P41245 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.16□□□□□ -0.3
Mmp9P41245 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Mmp9P41245 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp9P41245 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp9P41245 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Mmp9P41245 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Mmp9P41245 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp9P41245 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Mmp9P41245 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp9P41245 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Mmp9P41245 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp9P41245 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Mmp9P41245 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.14□□□□□ -0.31
Mmp9P41245 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Mmp9P41245 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms