Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Col18a1P39061 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC20.59■□□□□ 0.89
Col18a1P39061 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col18a1P39061 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Col18a1P39061 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col18a1P39061 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC20.58■□□□□ 0.89
Col18a1P39061 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col18a1P39061 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Col18a1P39061 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col18a1P39061 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col18a1P39061 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC20.58■□□□□ 0.89
Col18a1P39061 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col18a1P39061 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col18a1P39061 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col18a1P39061 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col18a1P39061 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col18a1P39061 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col18a1P39061 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col18a1P39061 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col18a1P39061 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col18a1P39061 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col18a1P39061 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col18a1P39061 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC20.57■□□□□ 0.88
Col18a1P39061 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC20.57■□□□□ 0.88
Col18a1P39061 Gm9522-201ENSMUST00000182394 926 ntBASIC20.57■□□□□ 0.88
Col18a1P39061 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC20.57■□□□□ 0.88
Col18a1P39061 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col18a1P39061 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Col18a1P39061 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Col18a1P39061 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm29310-201ENSMUST00000185468 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21825-201ENSMUST00000185728 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm29109-201ENSMUST00000185895 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21896-201ENSMUST00000186520 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21873-201ENSMUST00000186728 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21794-201ENSMUST00000187056 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21880-201ENSMUST00000187275 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21826-201ENSMUST00000187451 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21198-201ENSMUST00000188393 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21749-201ENSMUST00000189343 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21901-201ENSMUST00000189568 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm29424-201ENSMUST00000189716 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm28599-201ENSMUST00000189838 694 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21867-201ENSMUST00000189917 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm29269-201ENSMUST00000190087 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21722-201ENSMUST00000190153 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm28423-201ENSMUST00000190701 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21899-201ENSMUST00000190745 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21910-201ENSMUST00000191163 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21849-201ENSMUST00000191571 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm28678-201ENSMUST00000191593 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm20910-201ENSMUST00000193268 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Gm21871-201ENSMUST00000194621 696 ntBASIC20.56■□□□□ 0.88
Col18a1P39061 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col18a1P39061 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.55■□□□□ 0.88
Col18a1P39061 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col18a1P39061 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col18a1P39061 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col18a1P39061 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col18a1P39061 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC20.55■□□□□ 0.88
Col18a1P39061 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col18a1P39061 AC166349.1-201ENSMUST00000220866 695 ntBASIC20.55■□□□□ 0.88
Col18a1P39061 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col18a1P39061 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC20.55■□□□□ 0.88
Col18a1P39061 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col18a1P39061 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.55■□□□□ 0.88
Col18a1P39061 Gm38327-201ENSMUST00000195852 1755 ntBASIC20.55■□□□□ 0.88
Col18a1P39061 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col18a1P39061 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC20.54■□□□□ 0.88
Col18a1P39061 AC159006.1-201ENSMUST00000226396 258 ntBASIC20.54■□□□□ 0.88
Col18a1P39061 CT009510.1-201ENSMUST00000227972 270 ntBASIC20.54■□□□□ 0.88
Col18a1P39061 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Col18a1P39061 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 Gm11918-201ENSMUST00000121660 179 ntBASIC20.54■□□□□ 0.88
Col18a1P39061 Gm37917-201ENSMUST00000194711 392 ntBASIC20.54■□□□□ 0.88
Col18a1P39061 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col18a1P39061 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC20.54■□□□□ 0.88
Col18a1P39061 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms