Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox5P35710 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Sox5P35710 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.07■□□□□ 0.32
Sox5P35710 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.07■□□□□ 0.32
Sox5P35710 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sox5P35710 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Gm9013-201ENSMUST00000132939 882 ntBASIC17.07■□□□□ 0.32
Sox5P35710 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sox5P35710 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sox5P35710 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.07■□□□□ 0.32
Sox5P35710 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox5P35710 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.07■□□□□ 0.32
Sox5P35710 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.06■□□□□ 0.32
Sox5P35710 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Gm10013-201ENSMUST00000106074 672 ntBASIC17.06■□□□□ 0.32
Sox5P35710 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.06■□□□□ 0.32
Sox5P35710 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.06■□□□□ 0.32
Sox5P35710 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.06■□□□□ 0.32
Sox5P35710 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.06■□□□□ 0.32
Sox5P35710 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sox5P35710 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox5P35710 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.05■□□□□ 0.32
Sox5P35710 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Sox5P35710 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.05■□□□□ 0.32
Sox5P35710 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.05■□□□□ 0.32
Sox5P35710 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.05■□□□□ 0.32
Sox5P35710 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.05■□□□□ 0.32
Sox5P35710 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.05■□□□□ 0.32
Sox5P35710 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.05■□□□□ 0.32
Sox5P35710 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox5P35710 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Sox5P35710 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.05■□□□□ 0.32
Sox5P35710 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox5P35710 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox5P35710 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sox5P35710 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sox5P35710 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Sox5P35710 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Sox5P35710 Gm6345-202ENSMUST00000180900 204 ntBASIC17.04■□□□□ 0.32
Sox5P35710 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sox5P35710 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.04■□□□□ 0.32
Sox5P35710 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.04■□□□□ 0.32
Sox5P35710 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sox5P35710 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sox5P35710 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox5P35710 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms