Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Foxa1P35582 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.46□□□□□ -0.1
Foxa1P35582 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Foxa1P35582 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Foxa1P35582 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Foxa1P35582 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.46□□□□□ -0.1
Foxa1P35582 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Foxa1P35582 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Foxa1P35582 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.45□□□□□ -0.1
Foxa1P35582 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.45□□□□□ -0.1
Foxa1P35582 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.45□□□□□ -0.1
Foxa1P35582 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.45□□□□□ -0.1
Foxa1P35582 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Gm4535-201ENSMUST00000182274 558 ntBASIC14.45□□□□□ -0.1
Foxa1P35582 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.45□□□□□ -0.1
Foxa1P35582 Gm6296-201ENSMUST00000222599 943 ntBASIC14.45□□□□□ -0.1
Foxa1P35582 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Gm10355-201ENSMUST00000097146 517 ntBASIC14.45□□□□□ -0.1
Foxa1P35582 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.45□□□□□ -0.1
Foxa1P35582 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Foxa1P35582 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Foxa1P35582 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Foxa1P35582 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.44□□□□□ -0.1
Foxa1P35582 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.44□□□□□ -0.1
Foxa1P35582 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.44□□□□□ -0.1
Foxa1P35582 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Foxa1P35582 Gm8344-201ENSMUST00000119813 856 ntBASIC14.44□□□□□ -0.1
Foxa1P35582 Gm11452-201ENSMUST00000122376 690 ntBASIC14.44□□□□□ -0.1
Foxa1P35582 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Gm19164-201ENSMUST00000210667 640 ntBASIC14.44□□□□□ -0.1
Foxa1P35582 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Grk6-207ENSMUST00000225925 2769 ntBASIC14.44□□□□□ -0.1
Foxa1P35582 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Foxa1P35582 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.44□□□□□ -0.1
Foxa1P35582 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Gm13418-201ENSMUST00000119097 944 ntBASIC14.43□□□□□ -0.1
Foxa1P35582 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.43□□□□□ -0.1
Foxa1P35582 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.43□□□□□ -0.1
Foxa1P35582 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.43□□□□□ -0.1
Foxa1P35582 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.43□□□□□ -0.1
Foxa1P35582 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.43□□□□□ -0.1
Foxa1P35582 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.43□□□□□ -0.1
Foxa1P35582 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Foxa1P35582 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Gm6376-201ENSMUST00000209407 580 ntBASIC14.43□□□□□ -0.1
Foxa1P35582 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Foxa1P35582 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Foxa1P35582 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Foxa1P35582 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms