Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp13P33435 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Mmp13P33435 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.04■□□□□ 0.16
Mmp13P33435 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.04■□□□□ 0.16
Mmp13P33435 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp13P33435 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp13P33435 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp13P33435 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp13P33435 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp13P33435 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp13P33435 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp13P33435 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.04■□□□□ 0.16
Mmp13P33435 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.03■□□□□ 0.16
Mmp13P33435 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.03■□□□□ 0.16
Mmp13P33435 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Mmp13P33435 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.03■□□□□ 0.16
Mmp13P33435 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Mir3081-201ENSMUST00000175305 84 ntBASIC16.03■□□□□ 0.16
Mmp13P33435 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.03■□□□□ 0.16
Mmp13P33435 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.03■□□□□ 0.16
Mmp13P33435 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp13P33435 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp13P33435 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp13P33435 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp13P33435 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp13P33435 BC037039-201ENSMUST00000192003 2205 ntBASIC16.02■□□□□ 0.16
Mmp13P33435 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Mmp13P33435 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp13P33435 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Mmp13P33435 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp13P33435 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.02■□□□□ 0.16
Mmp13P33435 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Mmp13P33435 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.02■□□□□ 0.16
Mmp13P33435 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Mmp13P33435 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Mmp13P33435 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp13P33435 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Mmp13P33435 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.02■□□□□ 0.15
Mmp13P33435 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp13P33435 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.02■□□□□ 0.15
Mmp13P33435 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.02■□□□□ 0.15
Mmp13P33435 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp13P33435 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Mmp13P33435 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
Mmp13P33435 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Mmp13P33435 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.01■□□□□ 0.15
Mmp13P33435 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.01■□□□□ 0.15
Mmp13P33435 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.01■□□□□ 0.15
Mmp13P33435 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Mmp13P33435 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Mmp13P33435 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp13P33435 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16■□□□□ 0.15
Mmp13P33435 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Mmp13P33435 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Mmp13P33435 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16■□□□□ 0.15
Mmp13P33435 Gm10052-201ENSMUST00000168019 960 ntBASIC16■□□□□ 0.15
Mmp13P33435 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Gm18669-201ENSMUST00000216049 778 ntBASIC16■□□□□ 0.15
Mmp13P33435 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Gm7729-201ENSMUST00000050143 801 ntBASIC16■□□□□ 0.15
Mmp13P33435 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Mmp13P33435 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Mmp13P33435 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Mmp13P33435 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16■□□□□ 0.15
Mmp13P33435 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp13P33435 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms