Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vcam1P29533 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vcam1P29533 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Gm11025-201ENSMUST00000140773 466 ntBASIC17.9■□□□□ 0.46
Vcam1P29533 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.9■□□□□ 0.46
Vcam1P29533 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.9■□□□□ 0.46
Vcam1P29533 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Vcam1P29533 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Vcam1P29533 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Vcam1P29533 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vcam1P29533 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vcam1P29533 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.89■□□□□ 0.46
Vcam1P29533 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.89■□□□□ 0.46
Vcam1P29533 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vcam1P29533 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vcam1P29533 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.89■□□□□ 0.45
Vcam1P29533 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vcam1P29533 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vcam1P29533 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.89■□□□□ 0.45
Vcam1P29533 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.89■□□□□ 0.45
Vcam1P29533 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.89■□□□□ 0.45
Vcam1P29533 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vcam1P29533 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Vcam1P29533 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vcam1P29533 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Vcam1P29533 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vcam1P29533 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vcam1P29533 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Vcam1P29533 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vcam1P29533 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Vcam1P29533 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Vcam1P29533 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.88■□□□□ 0.45
Vcam1P29533 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Vcam1P29533 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Vcam1P29533 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.88■□□□□ 0.45
Vcam1P29533 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Vcam1P29533 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.88■□□□□ 0.45
Vcam1P29533 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.88■□□□□ 0.45
Vcam1P29533 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.88■□□□□ 0.45
Vcam1P29533 Auts2-212ENSMUST00000178555 309 ntBASIC17.88■□□□□ 0.45
Vcam1P29533 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.88■□□□□ 0.45
Vcam1P29533 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Vcam1P29533 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Vcam1P29533 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Vcam1P29533 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vcam1P29533 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcam1P29533 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC17.87■□□□□ 0.45
Vcam1P29533 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcam1P29533 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcam1P29533 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcam1P29533 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.87■□□□□ 0.45
Vcam1P29533 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.87■□□□□ 0.45
Vcam1P29533 Gm44335-201ENSMUST00000196879 141 ntBASIC17.87■□□□□ 0.45
Vcam1P29533 Gm44297-201ENSMUST00000198304 141 ntBASIC17.87■□□□□ 0.45
Vcam1P29533 Gm44346-201ENSMUST00000198851 141 ntBASIC17.87■□□□□ 0.45
Vcam1P29533 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.87■□□□□ 0.45
Vcam1P29533 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcam1P29533 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcam1P29533 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcam1P29533 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcam1P29533 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.87■□□□□ 0.45
Vcam1P29533 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcam1P29533 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vcam1P29533 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcam1P29533 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vcam1P29533 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Vcam1P29533 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcam1P29533 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Vcam1P29533 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vcam1P29533 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms