Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.41□□□□□ -0.1
Cd40lgP27548 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Birc2-201ENSMUST00000054878 378 ntBASIC14.41□□□□□ -0.1
Cd40lgP27548 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cd40lgP27548 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cd40lgP27548 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cd40lgP27548 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cd40lgP27548 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd40lgP27548 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cd40lgP27548 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cd40lgP27548 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cd40lgP27548 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cd40lgP27548 Gm27867-201ENSMUST00000184778 125 ntBASIC14.4□□□□□ -0.1
Cd40lgP27548 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.4□□□□□ -0.1
Cd40lgP27548 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.4□□□□□ -0.1
Cd40lgP27548 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.4□□□□□ -0.1
Cd40lgP27548 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cd40lgP27548 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd40lgP27548 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Gm28659-201ENSMUST00000188013 759 ntBASIC14.39□□□□□ -0.11
Cd40lgP27548 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cd40lgP27548 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd40lgP27548 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40lgP27548 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40lgP27548 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cd40lgP27548 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40lgP27548 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40lgP27548 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40lgP27548 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cd40lgP27548 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40lgP27548 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40lgP27548 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40lgP27548 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.38□□□□□ -0.11
Cd40lgP27548 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Cd40lgP27548 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40lgP27548 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd40lgP27548 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms