Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Gm8344-201ENSMUST00000119813 856 ntBASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tnfrsf1bP25119 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Gm11780-201ENSMUST00000136880 516 ntBASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tnfrsf1bP25119 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Gm25990-201ENSMUST00000102440 86 ntBASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Gm7862-201ENSMUST00000121461 292 ntBASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Tnfrsf1bP25119 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.46□□□□□ -0.1
Tnfrsf1bP25119 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.46□□□□□ -0.1
Tnfrsf1bP25119 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfrsf1bP25119 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfrsf1bP25119 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tnfrsf1bP25119 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Gm19164-201ENSMUST00000210667 640 ntBASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tnfrsf1bP25119 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Tnfrsf1bP25119 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1bP25119 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1bP25119 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1bP25119 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tnfrsf1bP25119 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms