Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1aP25118 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1aP25118 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1aP25118 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tnfrsf1aP25118 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Gm6659-201ENSMUST00000174752 547 ntBASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.12□□□□□ -0.31
Tnfrsf1aP25118 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Gm6257-201ENSMUST00000163864 910 ntBASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tnfrsf1aP25118 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tnfrsf1aP25118 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tnfrsf1aP25118 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms