Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Hoxc6P10629 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.29■□□□□ 0.36
Hoxc6P10629 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.29■□□□□ 0.36
Hoxc6P10629 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.29■□□□□ 0.36
Hoxc6P10629 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.29■□□□□ 0.36
Hoxc6P10629 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.29■□□□□ 0.36
Hoxc6P10629 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxc6P10629 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hoxc6P10629 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm22065-201ENSMUST00000103753 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm22066-201ENSMUST00000103761 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm24932-201ENSMUST00000103763 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm24115-201ENSMUST00000103799 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm22190-201ENSMUST00000103827 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm22191-201ENSMUST00000103831 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm24721-201ENSMUST00000103849 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm28018-201ENSMUST00000103869 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm26399-201ENSMUST00000103937 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm9385-201ENSMUST00000117563 472 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.28■□□□□ 0.36
Hoxc6P10629 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxc6P10629 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm25349-201ENSMUST00000177728 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm23616-201ENSMUST00000177797 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm25871-201ENSMUST00000177816 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm24752-201ENSMUST00000178240 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm24496-201ENSMUST00000178287 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm25649-201ENSMUST00000178476 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm25548-201ENSMUST00000178681 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm23147-201ENSMUST00000178841 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm26095-201ENSMUST00000179270 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm22171-201ENSMUST00000179283 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm23936-201ENSMUST00000179354 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm22619-201ENSMUST00000179516 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm25255-201ENSMUST00000179579 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm24755-201ENSMUST00000179691 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm26506-201ENSMUST00000179692 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm25086-201ENSMUST00000179931 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm23243-201ENSMUST00000180047 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm24659-201ENSMUST00000180212 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm24169-201ENSMUST00000180244 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm23689-201ENSMUST00000180354 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm27359-201ENSMUST00000184153 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm27785-201ENSMUST00000184268 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm27466-201ENSMUST00000184396 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm27703-201ENSMUST00000184836 110 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm2272-201ENSMUST00000194903 582 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hoxc6P10629 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.28■□□□□ 0.36
Hoxc6P10629 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxc6P10629 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc6P10629 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hoxc6P10629 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hoxc6P10629 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc6P10629 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc6P10629 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc6P10629 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc6P10629 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc6P10629 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.27■□□□□ 0.36
Hoxc6P10629 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hoxc6P10629 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxc6P10629 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc6P10629 Gm16198-201ENSMUST00000118766 670 ntBASIC17.27■□□□□ 0.36
Hoxc6P10629 Gm22175-201ENSMUST00000175007 78 ntBASIC17.27■□□□□ 0.36
Hoxc6P10629 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.27■□□□□ 0.36
Hoxc6P10629 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxc6P10629 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxc6P10629 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxc6P10629 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.27■□□□□ 0.35
Hoxc6P10629 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxc6P10629 Grk6-207ENSMUST00000225925 2769 ntBASIC17.27■□□□□ 0.35
Hoxc6P10629 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxc6P10629 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms