Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp6P0C0A3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp6P0C0A3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp6P0C0A3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp6P0C0A3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp6P0C0A3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Chmp6P0C0A3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Gm34391-201ENSMUST00000203706 907 ntBASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chmp6P0C0A3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Gm27741-201ENSMUST00000185060 237 ntBASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chmp6P0C0A3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.02■□□□□ 0.31
Chmp6P0C0A3 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp6P0C0A3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp6P0C0A3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Chmp6P0C0A3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp6P0C0A3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chmp6P0C0A3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Chmp6P0C0A3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Birc2-201ENSMUST00000054878 378 ntBASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chmp6P0C0A3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Chmp6P0C0A3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17■□□□□ 0.31
Chmp6P0C0A3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17■□□□□ 0.31
Chmp6P0C0A3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17■□□□□ 0.31
Chmp6P0C0A3 Gm7506-201ENSMUST00000207758 815 ntBASIC17■□□□□ 0.31
Chmp6P0C0A3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Chmp6P0C0A3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chmp6P0C0A3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Chmp6P0C0A3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms