Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.82□□□□□ -0.04
ApoeP08226 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ApoeP08226 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.82□□□□□ -0.04
ApoeP08226 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.81□□□□□ -0.04
ApoeP08226 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
ApoeP08226 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ApoeP08226 Gm26039-201ENSMUST00000158152 144 ntBASIC14.81□□□□□ -0.04
ApoeP08226 Mir6404-201ENSMUST00000183699 94 ntBASIC14.81□□□□□ -0.04
ApoeP08226 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
ApoeP08226 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.81□□□□□ -0.04
ApoeP08226 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ApoeP08226 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ApoeP08226 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ApoeP08226 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
ApoeP08226 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
ApoeP08226 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.8□□□□□ -0.04
ApoeP08226 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Mir1668-201ENSMUST00000184114 107 ntBASIC14.8□□□□□ -0.04
ApoeP08226 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.8□□□□□ -0.04
ApoeP08226 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.8□□□□□ -0.04
ApoeP08226 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.8□□□□□ -0.04
ApoeP08226 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ApoeP08226 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ApoeP08226 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
ApoeP08226 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.79□□□□□ -0.04
ApoeP08226 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.79□□□□□ -0.04
ApoeP08226 Gm44430-201ENSMUST00000203376 995 ntBASIC14.79□□□□□ -0.04
ApoeP08226 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.79□□□□□ -0.04
ApoeP08226 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ApoeP08226 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
ApoeP08226 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.78□□□□□ -0.04
ApoeP08226 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ApoeP08226 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ApoeP08226 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ApoeP08226 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms