Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.84■□□□□ 0.29
Vti1aO89116 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Vti1aO89116 Gm9727-201ENSMUST00000161387 555 ntBASIC16.84■□□□□ 0.29
Vti1aO89116 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Vti1aO89116 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.84■□□□□ 0.29
Vti1aO89116 Gm27397-201ENSMUST00000184997 107 ntBASIC16.84■□□□□ 0.29
Vti1aO89116 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.84■□□□□ 0.29
Vti1aO89116 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.84■□□□□ 0.29
Vti1aO89116 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.84■□□□□ 0.29
Vti1aO89116 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vti1aO89116 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Vti1aO89116 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vti1aO89116 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vti1aO89116 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vti1aO89116 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vti1aO89116 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vti1aO89116 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Vti1aO89116 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vti1aO89116 Gm24513-201ENSMUST00000174964 138 ntBASIC16.83■□□□□ 0.28
Vti1aO89116 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.83■□□□□ 0.28
Vti1aO89116 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.83■□□□□ 0.28
Vti1aO89116 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.83■□□□□ 0.28
Vti1aO89116 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.83■□□□□ 0.28
Vti1aO89116 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.83■□□□□ 0.28
Vti1aO89116 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vti1aO89116 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.82■□□□□ 0.28
Vti1aO89116 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Vti1aO89116 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Vti1aO89116 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.82■□□□□ 0.28
Vti1aO89116 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm8825-201ENSMUST00000182565 998 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm4518-201ENSMUST00000182638 718 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.82■□□□□ 0.28
Vti1aO89116 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.82■□□□□ 0.28
Vti1aO89116 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.82■□□□□ 0.28
Vti1aO89116 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vti1aO89116 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms