Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sh2d1aO88890 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.09□□□□□ -0.63
Sh2d1aO88890 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Gm6659-201ENSMUST00000174752 547 ntBASIC11.09□□□□□ -0.63
Sh2d1aO88890 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Gm29518-201ENSMUST00000190858 372 ntBASIC11.09□□□□□ -0.63
Sh2d1aO88890 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sh2d1aO88890 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.09□□□□□ -0.63
Sh2d1aO88890 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.08□□□□□ -0.63
Sh2d1aO88890 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sh2d1aO88890 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Gm25016-201ENSMUST00000158399 131 ntBASIC11.08□□□□□ -0.64
Sh2d1aO88890 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Sh2d1aO88890 AC158538.1-201ENSMUST00000225870 294 ntBASIC11.08□□□□□ -0.64
Sh2d1aO88890 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Sh2d1aO88890 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Sh2d1aO88890 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms