Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Slc28a2O88627 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Slc28a2O88627 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.93□□□□□ -0.18
Slc28a2O88627 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Slc28a2O88627 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Slc28a2O88627 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Slc28a2O88627 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Slc28a2O88627 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Slc28a2O88627 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Slc28a2O88627 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Mir770-201ENSMUST00000103252 94 ntBASIC13.92□□□□□ -0.18
Slc28a2O88627 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Slc28a2O88627 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Slc28a2O88627 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Gm25016-201ENSMUST00000158399 131 ntBASIC13.92□□□□□ -0.18
Slc28a2O88627 Gm5587-201ENSMUST00000206270 674 ntBASIC13.92□□□□□ -0.18
Slc28a2O88627 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.92□□□□□ -0.18
Slc28a2O88627 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Slc28a2O88627 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Slc28a2O88627 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc28a2O88627 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.91□□□□□ -0.18
Slc28a2O88627 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.91□□□□□ -0.18
Slc28a2O88627 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Slc28a2O88627 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Slc28a2O88627 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Slc28a2O88627 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.91□□□□□ -0.18
Slc28a2O88627 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.91□□□□□ -0.18
Slc28a2O88627 Gm10052-201ENSMUST00000168019 960 ntBASIC13.91□□□□□ -0.18
Slc28a2O88627 Gm6623-201ENSMUST00000173570 544 ntBASIC13.91□□□□□ -0.18
Slc28a2O88627 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.91□□□□□ -0.18
Slc28a2O88627 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Slc28a2O88627 Gm7729-201ENSMUST00000050143 801 ntBASIC13.91□□□□□ -0.18
Slc28a2O88627 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Slc28a2O88627 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc28a2O88627 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Slc28a2O88627 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc28a2O88627 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc28a2O88627 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc28a2O88627 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc28a2O88627 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Slc28a2O88627 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc28a2O88627 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms