Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmx1bO88609 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmx1bO88609 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmx1bO88609 Gm5867-201ENSMUST00000063197 592 ntBASIC14.16□□□□□ -0.14
Lmx1bO88609 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmx1bO88609 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lmx1bO88609 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lmx1bO88609 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lmx1bO88609 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmx1bO88609 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lmx1bO88609 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Lmx1bO88609 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.15□□□□□ -0.14
Lmx1bO88609 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Lmx1bO88609 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Lmx1bO88609 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.15□□□□□ -0.14
Lmx1bO88609 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lmx1bO88609 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.15□□□□□ -0.14
Lmx1bO88609 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.15□□□□□ -0.14
Lmx1bO88609 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.15□□□□□ -0.14
Lmx1bO88609 AV026068-213ENSMUST00000223675 1171 ntBASIC14.15□□□□□ -0.14
Lmx1bO88609 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lmx1bO88609 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.15□□□□□ -0.14
Lmx1bO88609 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lmx1bO88609 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.15□□□□□ -0.14
Lmx1bO88609 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.15□□□□□ -0.15
Lmx1bO88609 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.14□□□□□ -0.15
Lmx1bO88609 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lmx1bO88609 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Lmx1bO88609 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Lmx1bO88609 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Lmx1bO88609 Prob1-201ENSMUST00000097619 3021 ntBASIC14.14□□□□□ -0.15
Lmx1bO88609 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.14□□□□□ -0.15
Lmx1bO88609 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.14□□□□□ -0.15
Lmx1bO88609 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lmx1bO88609 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.14□□□□□ -0.15
Lmx1bO88609 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.14□□□□□ -0.15
Lmx1bO88609 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.14□□□□□ -0.15
Lmx1bO88609 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Lmx1bO88609 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.14□□□□□ -0.15
Lmx1bO88609 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.14□□□□□ -0.15
Lmx1bO88609 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lmx1bO88609 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.14□□□□□ -0.15
Lmx1bO88609 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmx1bO88609 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.13□□□□□ -0.15
Lmx1bO88609 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Lmx1bO88609 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmx1bO88609 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lmx1bO88609 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Lmx1bO88609 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.13□□□□□ -0.15
Lmx1bO88609 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Lmx1bO88609 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lmx1bO88609 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.13□□□□□ -0.15
Lmx1bO88609 Gm11594-201ENSMUST00000122313 162 ntBASIC14.13□□□□□ -0.15
Lmx1bO88609 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Lmx1bO88609 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms