Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC9.53□□□□□ -0.88
Gm10139O88245 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Gm10139O88245 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
Gm10139O88245 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC9.53□□□□□ -0.88
Gm10139O88245 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Gm15794-201ENSMUST00000120182 631 ntBASIC9.53□□□□□ -0.88
Gm10139O88245 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC9.53□□□□□ -0.88
Gm10139O88245 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Gm10231-201ENSMUST00000181584 441 ntBASIC9.53□□□□□ -0.88
Gm10139O88245 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC9.53□□□□□ -0.88
Gm10139O88245 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Gm10175-202ENSMUST00000208752 441 ntBASIC9.53□□□□□ -0.88
Gm10139O88245 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Gm10139O88245 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Gm10139O88245 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC9.53□□□□□ -0.88
Gm10139O88245 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC9.53□□□□□ -0.88
Gm10139O88245 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Gm10139O88245 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10139O88245 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10139O88245 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10139O88245 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.88
Gm10139O88245 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC9.52□□□□□ -0.88
Gm10139O88245 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10139O88245 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
Gm10139O88245 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10139O88245 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10139O88245 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10139O88245 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Gm10139O88245 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Gm10139O88245 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Gm10139O88245 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC9.52□□□□□ -0.89
Gm10139O88245 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 AC174678.1-201ENSMUST00000228007 2749 ntBASIC9.52□□□□□ -0.89
Gm10139O88245 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Gm10139O88245 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Gm13337-201ENSMUST00000119183 1594 ntBASIC9.52□□□□□ -0.89
Gm10139O88245 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC9.52□□□□□ -0.89
Gm10139O88245 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC9.52□□□□□ -0.89
Gm10139O88245 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC9.52□□□□□ -0.89
Gm10139O88245 Gm17808-201ENSMUST00000200859 894 ntBASIC9.52□□□□□ -0.89
Gm10139O88245 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC9.52□□□□□ -0.89
Gm10139O88245 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Gm8258-201ENSMUST00000055593 1449 ntBASIC9.52□□□□□ -0.89
Gm10139O88245 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Gm10139O88245 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Gm10139O88245 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Gm10139O88245 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Gm10139O88245 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10139O88245 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Gm10139O88245 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Gm10139O88245 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Gm10139O88245 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms