Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc3O88196 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc3O88196 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ttc3O88196 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc3O88196 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc3O88196 Rpph1-201ENSMUST00000175096 319 ntBASIC16.28■□□□□ 0.2
Ttc3O88196 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.28■□□□□ 0.2
Ttc3O88196 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.28■□□□□ 0.2
Ttc3O88196 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ttc3O88196 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ttc3O88196 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ttc3O88196 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc3O88196 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Ttc3O88196 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ttc3O88196 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc3O88196 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc3O88196 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ttc3O88196 Gm16198-201ENSMUST00000118766 670 ntBASIC16.27■□□□□ 0.2
Ttc3O88196 Gm10499-201ENSMUST00000174094 934 ntBASIC16.27■□□□□ 0.2
Ttc3O88196 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc3O88196 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.27■□□□□ 0.2
Ttc3O88196 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.27■□□□□ 0.2
Ttc3O88196 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.27■□□□□ 0.2
Ttc3O88196 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.27■□□□□ 0.2
Ttc3O88196 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc3O88196 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc3O88196 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ttc3O88196 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ttc3O88196 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.27■□□□□ 0.2
Ttc3O88196 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.27■□□□□ 0.2
Ttc3O88196 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc3O88196 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc3O88196 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc3O88196 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ttc3O88196 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc3O88196 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.27■□□□□ 0.2
Ttc3O88196 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc3O88196 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ttc3O88196 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc3O88196 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.27■□□□□ 0.19
Ttc3O88196 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc3O88196 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Ttc3O88196 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.27■□□□□ 0.19
Ttc3O88196 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.27■□□□□ 0.19
Ttc3O88196 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc3O88196 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ttc3O88196 Gm17271-201ENSMUST00000165535 355 ntBASIC16.27■□□□□ 0.19
Ttc3O88196 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.27■□□□□ 0.19
Ttc3O88196 Gm20553-201ENSMUST00000204205 844 ntBASIC16.27■□□□□ 0.19
Ttc3O88196 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.27■□□□□ 0.19
Ttc3O88196 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc3O88196 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Ttc3O88196 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc3O88196 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ttc3O88196 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc3O88196 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc3O88196 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc3O88196 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ttc3O88196 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.26■□□□□ 0.19
Ttc3O88196 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.26■□□□□ 0.19
Ttc3O88196 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.26■□□□□ 0.19
Ttc3O88196 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Ttc3O88196 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Ttc3O88196 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ttc3O88196 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.26■□□□□ 0.19
Ttc3O88196 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.26■□□□□ 0.19
Ttc3O88196 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.26■□□□□ 0.19
Ttc3O88196 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ttc3O88196 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ttc3O88196 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ttc3O88196 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Ttc3O88196 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.25■□□□□ 0.19
Ttc3O88196 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms