Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.08■□□□□ 0.81
Ubr1O70481 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC20.08■□□□□ 0.81
Ubr1O70481 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr1O70481 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr1O70481 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr1O70481 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Ubr1O70481 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr1O70481 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Ubr1O70481 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ubr1O70481 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr1O70481 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.08■□□□□ 0.8
Ubr1O70481 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr1O70481 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr1O70481 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr1O70481 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC20.08■□□□□ 0.8
Ubr1O70481 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC20.08■□□□□ 0.8
Ubr1O70481 AC164567.1-201ENSMUST00000219185 960 ntBASIC20.08■□□□□ 0.8
Ubr1O70481 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr1O70481 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr1O70481 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr1O70481 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr1O70481 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr1O70481 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ubr1O70481 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Ubr1O70481 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Gm14026-201ENSMUST00000120625 1789 ntBASIC20.07■□□□□ 0.8
Ubr1O70481 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Ubr1O70481 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Gm23547-201ENSMUST00000158210 271 ntBASIC20.07■□□□□ 0.8
Ubr1O70481 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Gm27618-201ENSMUST00000183671 60 ntBASIC20.07■□□□□ 0.8
Ubr1O70481 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
Ubr1O70481 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC20.07■□□□□ 0.8
Ubr1O70481 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Ubr1O70481 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Ubr1O70481 Gm8096-201ENSMUST00000209921 1591 ntBASIC20.07■□□□□ 0.8
Ubr1O70481 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Gm42934-201ENSMUST00000196920 1345 ntBASIC20.07■□□□□ 0.8
Ubr1O70481 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ubr1O70481 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC20.06■□□□□ 0.8
Ubr1O70481 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Gm24158-201ENSMUST00000175263 71 ntBASIC20.06■□□□□ 0.8
Ubr1O70481 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC20.06■□□□□ 0.8
Ubr1O70481 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.06■□□□□ 0.8
Ubr1O70481 Klk2-ps-201ENSMUST00000205342 571 ntBASIC20.06■□□□□ 0.8
Ubr1O70481 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ubr1O70481 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ubr1O70481 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC20.06■□□□□ 0.8
Ubr1O70481 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Ubr1O70481 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ubr1O70481 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.06■□□□□ 0.8
Ubr1O70481 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Ubr1O70481 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Ubr1O70481 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ubr1O70481 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ubr1O70481 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC20.05■□□□□ 0.8
Ubr1O70481 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ubr1O70481 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ubr1O70481 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ubr1O70481 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ubr1O70481 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ubr1O70481 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ubr1O70481 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC20.05■□□□□ 0.8
Ubr1O70481 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC20.05■□□□□ 0.8
Ubr1O70481 Gm15483-201ENSMUST00000120338 456 ntBASIC20.05■□□□□ 0.8
Ubr1O70481 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC20.05■□□□□ 0.8
Ubr1O70481 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ubr1O70481 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ubr1O70481 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ubr1O70481 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms