Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.42■□□□□ 0.06
Pdlim1O70400 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Pdlim1O70400 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.42■□□□□ 0.06
Pdlim1O70400 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.42■□□□□ 0.06
Pdlim1O70400 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.42■□□□□ 0.06
Pdlim1O70400 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pdlim1O70400 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pdlim1O70400 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pdlim1O70400 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pdlim1O70400 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
Pdlim1O70400 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Pdlim1O70400 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.41■□□□□ 0.06
Pdlim1O70400 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pdlim1O70400 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Gm7222-201ENSMUST00000117512 906 ntBASIC15.41■□□□□ 0.06
Pdlim1O70400 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.41■□□□□ 0.06
Pdlim1O70400 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pdlim1O70400 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Pdlim1O70400 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.41■□□□□ 0.06
Pdlim1O70400 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pdlim1O70400 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Gm10060-201ENSMUST00000212002 111 ntBASIC15.41■□□□□ 0.06
Pdlim1O70400 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.41■□□□□ 0.06
Pdlim1O70400 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.41■□□□□ 0.06
Pdlim1O70400 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.41■□□□□ 0.06
Pdlim1O70400 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Pdlim1O70400 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Pdlim1O70400 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pdlim1O70400 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pdlim1O70400 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pdlim1O70400 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.4■□□□□ 0.06
Pdlim1O70400 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.4■□□□□ 0.06
Pdlim1O70400 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.4■□□□□ 0.06
Pdlim1O70400 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Pdlim1O70400 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.4■□□□□ 0.06
Pdlim1O70400 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Pdlim1O70400 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Pdlim1O70400 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Pdlim1O70400 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pdlim1O70400 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.4■□□□□ 0.06
Pdlim1O70400 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.4■□□□□ 0.06
Pdlim1O70400 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pdlim1O70400 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Pdlim1O70400 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pdlim1O70400 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pdlim1O70400 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pdlim1O70400 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms