Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.2□□□□□ -0.3
Cxcl13O55038 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Cxcl13O55038 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Cxcl13O55038 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Gm6736-201ENSMUST00000166583 948 ntBASIC13.2□□□□□ -0.3
Cxcl13O55038 Gm2756-201ENSMUST00000195851 400 ntBASIC13.2□□□□□ -0.3
Cxcl13O55038 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.2□□□□□ -0.3
Cxcl13O55038 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cxcl13O55038 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cxcl13O55038 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.2□□□□□ -0.3
Cxcl13O55038 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cxcl13O55038 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cxcl13O55038 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.19□□□□□ -0.3
Cxcl13O55038 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cxcl13O55038 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.19□□□□□ -0.3
Cxcl13O55038 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.19□□□□□ -0.3
Cxcl13O55038 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Cxcl13O55038 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.19□□□□□ -0.3
Cxcl13O55038 Gm24513-201ENSMUST00000174964 138 ntBASIC13.19□□□□□ -0.3
Cxcl13O55038 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.19□□□□□ -0.3
Cxcl13O55038 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.19□□□□□ -0.3
Cxcl13O55038 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cxcl13O55038 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.18□□□□□ -0.3
Cxcl13O55038 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.18□□□□□ -0.3
Cxcl13O55038 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.18□□□□□ -0.3
Cxcl13O55038 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.18□□□□□ -0.3
Cxcl13O55038 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.18□□□□□ -0.3
Cxcl13O55038 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Gm4995-201ENSMUST00000117247 432 ntBASIC13.18□□□□□ -0.3
Cxcl13O55038 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Cxcl13O55038 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Gm27397-201ENSMUST00000184997 107 ntBASIC13.18□□□□□ -0.3
Cxcl13O55038 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cxcl13O55038 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.18□□□□□ -0.3
Cxcl13O55038 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.18□□□□□ -0.3
Cxcl13O55038 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Gm10175-201ENSMUST00000086013 645 ntBASIC13.18□□□□□ -0.3
Cxcl13O55038 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.18□□□□□ -0.3
Cxcl13O55038 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.18□□□□□ -0.3
Cxcl13O55038 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Cxcl13O55038 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Cxcl13O55038 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cxcl13O55038 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cxcl13O55038 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cxcl13O55038 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cxcl13O55038 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cxcl13O55038 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.17□□□□□ -0.3
Cxcl13O55038 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms