Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cldn5O54942 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Gm14722-201ENSMUST00000118943 689 ntBASIC16.2■□□□□ 0.18
Cldn5O54942 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Cldn5O54942 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.2■□□□□ 0.18
Cldn5O54942 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.2■□□□□ 0.18
Cldn5O54942 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cldn5O54942 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.2■□□□□ 0.18
Cldn5O54942 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.2■□□□□ 0.18
Cldn5O54942 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn5O54942 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.19■□□□□ 0.18
Cldn5O54942 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cldn5O54942 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cldn5O54942 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.19■□□□□ 0.18
Cldn5O54942 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.19■□□□□ 0.18
Cldn5O54942 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.19■□□□□ 0.18
Cldn5O54942 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.19■□□□□ 0.18
Cldn5O54942 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.19■□□□□ 0.18
Cldn5O54942 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.19■□□□□ 0.18
Cldn5O54942 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cldn5O54942 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cldn5O54942 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.19■□□□□ 0.18
Cldn5O54942 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn5O54942 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.18■□□□□ 0.18
Cldn5O54942 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn5O54942 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cldn5O54942 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn5O54942 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.18■□□□□ 0.18
Cldn5O54942 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.18■□□□□ 0.18
Cldn5O54942 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cldn5O54942 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cldn5O54942 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.18■□□□□ 0.18
Cldn5O54942 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cldn5O54942 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cldn5O54942 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cldn5O54942 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cldn5O54942 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn5O54942 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cldn5O54942 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn5O54942 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn5O54942 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.17■□□□□ 0.18
Cldn5O54942 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn5O54942 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn5O54942 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn5O54942 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn5O54942 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn5O54942 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cldn5O54942 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.17■□□□□ 0.18
Cldn5O54942 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.17■□□□□ 0.18
Cldn5O54942 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Cldn5O54942 Gm18489-201ENSMUST00000172565 551 ntBASIC16.17■□□□□ 0.18
Cldn5O54942 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.17■□□□□ 0.18
Cldn5O54942 Gm8000-201ENSMUST00000188378 592 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms